2024 Caper package r

Caper package r

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August undefined, 2024

WebThe caper package provides a set of tools for conducting phylogenetic comparative analyses in R. The main methods are phylogenetic independent contrasts and … http://caper.r-forge.r-project.org/

comparative.data : Comparative dataset creation

WebJan 1, 2013 · The Caper Package: Comparative Analysis of Phylogenetics and Evolution in R January 2013 Authors: David Orme Imperial College London Request full-text Abstract … WebFeb 12, 2024 · The 'caper' package requires your phylogeny and data to be in a special kind of R object called a comparative data object. This will match the species names in the tree to those in your data automatically so there is no need to worry about data being ordered correctly (as in some of the other packages in R). rowanmoor hornbuckle

phytools: an R package for phylogenetic comparative …

Webusing functions from the ape and nlme packages. There are several other ways to conduct PGLS analyses in R, most notably using the pgls function in the caper package. We … WebPackage ‘caper’ October 12, 2024 Type Package Title Comparative Analyses of Phylogenetics and Evolution in R Version 1.0.1 Date 2024-04-16 Author David Orme, Rob Freckleton, Gavin Thomas, Thomas Petzoldt, Su- WebNov 10, 2024 · Many developers of R packages for science are themselves scientists. They may be developing packages in their own time, or are trying to fit it into a busy schedule. … rowanmoor group limited companies house

GitHub - cran/caper: This is a read-only mirror of the …

How to get studentized residuals from pgls() in Caper R package

Webcaper: Comparative Analyses of Phylogenetics and Evolution in R Functions for performing phylogenetic comparative analyses. Documentation: Downloads: Reverse dependencies: … Mass - CRAN - Package caper Functions for reading, writing, plotting, and manipulating phylogenetic trees, … Xtable - CRAN - Package caper Computes multivariate normal and t probabilities, quantiles, random deviates … README for the caper package The caper package provides a set of tools for … Pez - CRAN - Package caper Motmot - CRAN - Package caper Computational tools to represent phylogenetic signals using adapted … Caper Results - CRAN - Package caper WebJan 1, 2013 · These analyses were performed in 'caper' (Orme et al., 2012) and 'ape' packages for R. Models were built using the ecological data as the independent … rowanmoor group limitedWebJun 3, 2015 · You also need the 'read.tree ()' function from the package ape to read phylogenetic trees into R ( http://cran.r-project.org/web/packages/ape/index.html) The function 'pgls ()' from the... rowanmoor group companies house

"Webusing functions from the ape and nlme packages. There are several other ways to conduct PGLS analyses in R, most notably using the pgls function in the caper package. We choose to present an analysis using nlme as this is mature, general purpose software with useful \helper" functions, and it ships with the base R distribution. " - Caper package r

Caper package r

WebPackage ‘caper’ October 12, 2024 Type Package Title Comparative Analyses of Phylogenetics and Evolution in R Version 1.0.1 Date 2024-04-16 Author David Orme, … http://caper.r-forge.r-project.org/

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WebMay 10, 2015 · The caper package: comparative analysis of phylogenetics and evolution in R David Orme November 29, 2013 This vignette documents the use of the caper … WebDescription A simple tool to combine phylogenies with datasets and ensure consistent structure and ordering for use in functions. Usage comparative.data (phy, data, names.col, vcv=FALSE, vcv.dim=2, na.omit=TRUE, force.root=FALSE, warn.dropped=FALSE, scope=NULL) # S3 method for comparative.data print (x, ...)

WebREADME for the caper package The caper package provides a set of tools for phylogenetic comparative analyses, primary implementations of phylogenetic independent contrasts and phylogenetic generalised least squares. The vignette for the package shows the use of the main functionality. This README is somewhat incomplete! Webrmhdanville.org

WebR: Comparative Analyses of Phylogenetics and Evolution in R Comparative Analyses of Phylogenetics and Evolution in R Documentation for package ‘caper’ version 1.0.1 DESCRIPTION file. User guides, package vignettes and other documentation. Help Pages ABCEFGIKLMNPRSTVmisc caper-package Comparative analysis of phylogenetics and … WebDec 19, 2024 · Package Dimensions ‎21.6 x 21 x 14.6 inches : Manufacturer Part Number ‎Q0105-USH5-A-1 : Additional Information. ASIN : B0BQJ9MC7X : Customer Reviews: 4.3 out of 5 stars 194 ratings. 4.3 out of 5 stars : Best Sellers Rank #283,148 in Automotive (See Top 100 in Automotive) #212 in RV & Trailer Covers:

WebFeb 12, 2024 · caper requires your phylogeny and your data to be in a special kind of R object called a comparative data object. This will match the species names in the tree to …

WebDec 15, 2011 · 1. Here, I present a new, multifunctional phylogenetics package, phytools, for the R statistical computing environment. 2. The focus of the package is on methods for phylogenetic comparative biology; … streaming channel bundlesWebMay 6, 2011 · caper-package: Comparative analysis of phylogenetics and evolution in R (caper) Description The caper package provides a set of functions to conduct comparative analyses using both independent contrasts and phylogenetic generalised least squares methods. rowanmoor family sippWebApr 16, 2024 · R Development Page Contributed R Packages . Below is a list of all packages provided by project caper - Comparative Analysis package.. Important note for package binaries: R-Forge provides these binaries only for the most recent version of R, but not for older versions. In order to successfully install the packages provided on R-Forge, … rowanmoor in administrationWebFeb 6, 2015 · R: Base functions cannot use object from the package Caper. I'm running a phylogenetic analysis using the caper package, where the regression function (which … rowanmoor fos decisionWebMay 6, 2011 · caper-package: Comparative analysis of phylogenetics and evolution in R (caper) Description The caper package provides a set of functions to conduct … streaming channel in salesforce rowanmoor in liquidationWebMay 2, 2024 · caper index Package overview R Package Documentation rdrr.io home R language documentation Run R code online Browse R Packages CRAN packages Bioconductor packages R-Forge packages GitHub packages We want your feedback! Note that we can't provide technical support on individual packages. You should contact … rowanmoor history